Tools development

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fastqc raw/sample_R1.fastq.gz raw/sample_R2.fastq.gz -o results/qc/ trimmomatic PE sample_R1.fastq.gz sample_R2.fastq.gz results/trimmed_R1.fastq.gz results/trimmed_R2.fastq.gz STAR --genomeDir genome_index --readFilesIn results/trimmed_R1.fastq.gz results/trimmed_R2.fastq.gz --outFileNamePrefix results/star/ featureCounts -a annotation.gtf -o results/counts.txt results/star/Aligned.out.sam

We create custom bioinformatics  tools designed to streamline your research, from small scripts to fully integrated analysis platforms and pipelines.

Data preprocessing & QC scripts


We develop custom scripts that automate repetitive and time-consuming tasks in your data workflows. From raw data cleaning and normalization to quality control checks, our tools ensure your datasets are accurate, consistent, and ready for downstream analysis. By streamlining these early steps, we help you reduce errors, save time, and focus on the biological insights rather than manual data handling.

Analysis pipelines


We design and implement end-to-end Nextflow pipelines that cover every step of your research project, from raw data processing to final results. Whether you work with genomics, transcriptomics, proteomics, or other high-throughput datasets, our pipelines are fully customizable, robust, and scalable to handle datasets of any size.

Data Visualization & Interactive Exploration


We create clear and interactive visual tools that make complex biological data easier to understand. From simple charts to dynamic dashboards, our solutions help you explore your results, spot patterns, and share insights with your team in an intuitive way. We leverage modern visualization frameworks (e.g., Plotly, R/Shiny, Dash) to deliver dynamic, user-friendly interfaces that make your data exploration seamless, whether you are validating hypotheses, presenting findings, or collaborating across teams.
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Need a custom script or a full project? Let’s build it together

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